đź’ˇ Wrong Head, Right Refund: Delhi High Court Backs Refund for GST Paid Under Wrong Head
- Bhagya Lakshmi
- May 13, 2025
- 3 min read
🏛️ Key Case Law:
M/s. Excel Buildtech Pvt. Ltd. vs. Commissioner of CGST,
Delhi South Court:Â Delhi High Court
Date of Order:Â 15 April 2024
Citation:Â 2024-VIL-225-DEL
đź“‹ Summary of the Case:
The petitioner, Excel Buildtech Pvt. Ltd., had wrongly paid CGST and SGSTÂ treating a transaction as intra-State.
Later, it was established that the transaction was actually inter-State, and IGSTÂ was the correct tax.
The company paid IGST correctly and applied for a refund of CGST and SGST.
The department rejected the refund on the grounds that the mistake was of the taxpayer.
⚖️ Court's Ruling:
The High Court held that Section 77 of the CGST Act and Rule 89(1A) clearly support refunds in such cases.
Mistakes in head of tax payment (CGST/SGST vs IGST) are covered under the law.
It directed the department to process the refund within 4 weeks.
đź§ľ Real-Life Example: Wrongly Paid IGST Instead of CGST + SGST
🧑‍💼 Company: ABC Traders – Registered in Telangana
📦 Transaction: Supply of goods to a buyer in Hyderabad (same state)
📌 What Actually Happened:
Return | Status | What was Done |
GSTR-1 | ✅ Filed correctly | Supply shown as intra-State with CGST + SGST breakup |
GSTR-3B | ❌ Error | Entire tax paid as IGST, due to a drop-down selection mistake |
Correction | ✅ Done | Correct CGST and SGST paid in next month’s return |
Refund Required | ✅ Yes | IGST wrongly paid must now be refunded |
⚖️ Legal Basis for Refund:
Law | Description |
Section 77(1), CGST Act | Refund when CGST/SGST is wrongly paid on inter-State supply |
Section 19(1), IGST Act | Refund when IGST is wrongly paid on intra-State supply |
Rule 89(1A) | Enables refund for wrong-head tax, time limit: 2 years from correct payment |
CBIC Circular 162/18/2021-GST | Clarifies the process for refund in such situations |
đź’» Step-by-Step Refund Process (When IGST was wrongly paid instead of CGST + SGST)
🪜 Step 1: Login and Navigate
Login to https://www.gst.gov.inGo to: Services → Refunds → Application for Refund
🪜 Step 2: Select Refund Type
Choose: “Refund on account of tax paid under wrong head”
🪜 Step 3: Provide Details
Month of GSTR-3BÂ with the error
Invoice details (same ones disclosed in GSTR-1)
Amount of IGST paid
Correct CGST + SGST challans
📝 Remarks Example:
“IGST wrongly paid instead of CGST + SGST. Supply was intra-State and disclosed correctly in GSTR-1.”
🪜 Step 4: Upload Documents
GSTR-1 summary (showing intra-State supply)
GSTR-3B summary
Correct payment challans
Reconciliation statement
Declaration (no unjust enrichment)
🪜 Step 5: Submit
Submit with DSC or EVCTrack application under “Refunds → Track Application Status”
🪜 Step 6: Refund Order
Refund is sanctioned via Form RFD-06Bank credit is done upon final processing.
đź“‹ Common Scenarios and Refund Eligibility:
Scenario | Tax Paid | Correct Tax | Refund of | Applicable Section |
Inter-State wrongly treated as Intra-State | CGST + SGST | CGST + SGST | Section 77 – CGST Act | |
Intra-State wrongly treated as Inter-State | IGST | CGST + SGST | IGST | Section 19 – IGST Act |
đź§ Practical Challenges & Solutions:
âť“ What if Portal Asks for Invoice-wise Details Again?
✅ Solution: Re-enter the same invoice details📝 Add remark: “Invoice already filed correctly in GSTR-1; refund claimed due to GSTR-3B head error.”
âť“ Do You Need to Revise the Invoice?
🚫 No. GST law does not require reissuance of invoices in such cases. Just pay the correct tax and claim refund under Section 19 or 77.
📌 Timeline Alert:
Refund must be filed within 2 years from date of correct tax payment (i.e., CGST + SGST in this case).
If error occurred before 24.09.2021, the 2-year time starts from that date as per CBIC circular.




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